Microbiome Research Reports
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Editor-in-Chief: Marco Ventura
Indexing: ESCI, Scopus, PMC, CAS, Lens,
Submission to first decision: 60 days
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Microbiome Research Reports
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Editor-in-Chief: Marco Ventura
Submission to first decision: 60 days
Home Articles Special Issues Volumes Webinars Videos

Microbiome Research Reports

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Articles

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Probiotic membrane vesicles: emerging tools for disease treatment

Jari Verbunt, ...Frank R. M. Stassen,
Open Access Review DOI: 10.20517/mrr.2025.20 23 Jun 2025
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Perinatal factors influencing the earliest establishment of the infant microbiome

Kevin LinehanKevin Linehan, ... Eugene M. DempseyEugene M. Dempsey
Open Access Original Article DOI: 10.20517/mrr.2024.92 11 Jun 2025
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Assessment of absolute abundance in mother-infant gut microbiome using marine-sourced bacterial DNA spike-in and comparison with conventional quantification methods

Shuo Wang, ... R. Paul RossR. Paul Ross
Open Access Original Article DOI: 10.20517/mrr.2024.94 8 Jun 2025
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Understanding the interaction between melatonin and bifidobacteria

Sonia Mirjam Rizzo, ...Francesca Turroni,
Open Access Original Article DOI: 10.20517/mrr.2025.10 14 May 2025
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Ex vivo study on prebiotic & choline combination to modulate gut bacteria, enhance choline bioavailability, and reduce TMA production

Ying Qi Goh, ... Yulan WangYulan Wang
Open Access Original Article DOI: 10.20517/mrr.2024.90 6 May 2025
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In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Julia Isenring, ... Christophe Lacroix
Open Access Review DOI: 10.20517/mrr.2022.15 16 Jan 2023
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Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access Review DOI: 10.20517/mrr.2023.05 12 Mar 2023
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Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

Alberto J.M. Martin, ... Daniel Garrido
Open Access Review DOI: 10.20517/mrr.2023.10 9 May 2023
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Papers from the 13th Probiotics, Prebiotics and New Foods Congress

Prof. Marco Ventura

Submission Deadline: 21 Feb 2026

Published articles: 0

Immunomodulatory properties of fermented foods via the gut microbiome

Dr. Silvia Melgar; Dr. José Ángel Salas-Millan; Dr. Enriqueta Garcia-Gutierrez

Submission Deadline: 31 Jan 2026

Published articles: 0

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Themed Collections
bifidobacteria
gut microbiota
microbiome
probiotics
bacteriophage
phages
antibiotics
microbial
infant gut
microbial ecology
intestinal microbiome
host-microbe interactions
intestinal fungi
microbial ecosystems
metagenomics
microbial DNA sequencing
bifidobacterium
genomic
irritable bowel syndrome
Topic: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
Topic: Exploring the Infant Microbiome: From Birth to Early Growth and Development
Topic: Microbiomes of Arthropods and Their Environments
Volume 4, Issue 2 (in progress)
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Special Issue: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
Microbiome Research Reports Receives Its First Impact Factor of 3.8
We are delighted to announce that Microbiome Research Reports (MRR) has received its first official Impact Factor of 3.8, as published in the 2025 edition of Clarivate's Journal Citation Reports (JCR) on June 18.
Microbiome Research Reports Launches the 2nd Recruitment for Early Career Editorial Board Members
We cordially invite outstanding early-career experts and scholars in microbiome research to join us in advancing academic excellence.
Microbiome Research Reports Announces 2024 Best Paper Award – Honoring Excellence in Microbiome Research
The Editorial Office of Microbiome Research Reports (MRR) is pleased to announce that the 2024 Best Paper Award has been granted to the seminal review article "In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls" by Prof. Christophe Lacroix et al.
Special Webinar: Brain-Gut-Microbiota Axis: Implications for Psychiatry
On March 24, 2025, Microbiome Research Reports successfully held the webinar on "Brain-Gut-Microbiota Axis: Implications for Psychiatry" presented by Prof. Ted Dinan.
A Special Interview with Prof. Gregor Reid - Fellow of the Royal Society of Canada and 2024 Highly Cited Researcher
On January 25, 2025, the Editorial Office of Microbiome Research Reports (MRR) was delighted to have a special interview with Prof. Gregor Reid, a Distinguished Professor Emeritus at Western University, Fellow of the Royal Society of Ca

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls
Julia Isenring, ... Christophe Lacroix
Open Access | Review | 16 Jan 2023
Views: | Downloads:
Download PDF
Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components
Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access | Review | 12 Mar 2023
Views: | Downloads:
Download PDF
Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium
Alberto J.M. Martin, ... Daniel Garrido
Open Access | Review | 9 May 2023
Views: | Downloads:
Download PDF

Papers from the 13th Probiotics, Prebiotics and New Foods Congress

Prof. Marco Ventura

Submission Deadline: 21 Feb 2026

Published articles: 0

Immunomodulatory properties of fermented foods via the gut microbiome

Dr. Silvia Melgar; Dr. José Ángel Salas-Millan; Dr. Enriqueta Garcia-Gutierrez

Submission Deadline: 31 Jan 2026

Published articles: 0

Coming soon.

Volume 4, Issue 2 (in progress)
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Microbiome Research Reports
ISSN 2771-5965 (Online)
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https://members.publicationethics.org/members/microbiome-research-reports

Portico

All published articles are preserved here permanently:

https://www.portico.org/publishers/oae/
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