Microbiome Research Reports

MRR Holds Its First Online Editorial Board Meeting

Collaborating globally to shape the future of the journal and advance microbiome research

Advancing Understanding in Microbiome Science: An Interview with Dr. David Rios‑Covian

Exploring gut microbial metabolism and its potential for innovative therapeutic applications - 2025 MRR High-Impact Paper Awardee

Microbiome Research Reports Announces 2025 Annual Academic Awards

Thanking scholars for their exceptional contributions to Microbiome Research Reports and the global microbiome community

Microbiome Research Reports Scholars Recognized among Highly Cited Researchers 2025

7 Editorial Board Members, 10 Contributing Authors, and 1 Guest Editor Honored for Outstanding Impact in Microbiology and Cross-Field Research

Microbiome Research Reports Receives Its First Impact Factor of 3.8

We are delighted to announce that Microbiome Research Reports (MRR) has received its first official Impact Factor of 3.8, as published in the 2025 edition of Clarivate's Journal Citation Reports (JCR) on June 18.

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

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A responder-informed gut microbial consortium enhances anti-PD-1 efficacy in a mouse cancer model

Uk Jin Jeong, ...Sang Sun Yoon

Open Access Original Article DOI: 10.20517/mrr.2025.117 8 Feb 2026

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MUC2 shifts the metabolic profiles of commensal bacteria in defined microbial communities

Erin Chard, ...Melinda A. Engevik

Open Access Original Article DOI: 10.20517/mrr.2025.91 20 Jan 2026

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Immunomodulatory properties of dietary polyphenols: a role for combating infections at mucosal surfaces?

Mona Sharma, ...Andrew R. Williams

Open Access Mini Review DOI: 10.20517/mrr.2025.81 9 Dec 2025

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Benchmarking and optimizing microbiome-based bioinformatics workflow for non-invasive detection of intestinal tumors

Yangyang Sun, ...Xiaoquan Su

Open Access Original Article DOI: 10.20517/mrr.2025.75 30 Nov 2025

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Most Cited Papers In Last Two Years

Past, present, and future of microbiome-based therapies

Pilar Manrique

, ... David Rios-Covian

Open Access Review DOI: 10.20517/mrr.2023.80 17 Mar 2024

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A host-microbial metabolite interaction gut-on-a-chip model of the adult human intestine demonstrates beneficial effects upon inulin treatment of gut microbiome

Joanne M. Donkers

, ... Evita van de Steeg

Open Access Original Article DOI: 10.20517/mrr.2023.79 21 Feb 2024

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Probiotics, prebiotics, synbiotics and other microbiome-based innovative therapeutics to mitigate obesity and enhance longevity via the gut-brain axis

Jacqueline L. Boyajian

, ... Satya Prakash

Open Access Review DOI: 10.20517/mrr.2024.05 16 May 2024

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Ongoing Special Topics

Tools and Resources for Microbiome Research

Prof. Wei-Hua Chen; Prof. Ju-Sheng Zheng

Submission Deadline: 7 Jul 2026

Published articles: 0

Diet, Microbiota, and Brain Health: Unraveling the Gut–Brain Axis in Nutrition and Mental Wellbeing

Prof. Xin Zhang

Submission Deadline: 30 Jun 2026

Published articles: 0

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Themed Collections

intestinal microbiome

host-microbe interactions

intestinal fungi

microbial ecosystems

metagenomics

microbial DNA sequencing

bifidobacterium

genomic

irritable bowel syndrome

Topics Collection

Topic: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality

Topic: Exploring the Infant Microbiome: From Birth to Early Growth and Development

Topic: Microbiomes of Arthropods and Their Environments

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Volume 4, Issue 4 (in progress)

Articles Collection

Special Issue: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality

News

The First Online Editorial Board Meeting of Microbiome Research Reports Successfully Held

Microbiome Research Reports Announces 2025 Annual Academic Awards

Microbiome Research Reports

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Articles

An overview of the role of the gut microbiota in rheumatoid arthritis

A responder-informed gut microbial consortium enhances anti-PD-1 efficacy in a mouse cancer model

MUC2 shifts the metabolic profiles of commensal bacteria in defined microbial communities

Immunomodulatory properties of dietary polyphenols: a role for combating infections at mucosal surfaces?

Benchmarking and optimizing microbiome-based bioinformatics workflow for non-invasive detection of intestinal tumors

Past, present, and future of microbiome-based therapies

A host-microbial metabolite interaction gut-on-a-chip model of the adult human intestine demonstrates beneficial effects upon inulin treatment of gut microbiome

Probiotics, prebiotics, synbiotics and other microbiome-based innovative therapeutics to mitigate obesity and enhance longevity via the gut-brain axis

Tools and Resources for Microbiome Research

Diet, Microbiota, and Brain Health: Unraveling the Gut–Brain Axis in Nutrition and Mental Wellbeing

Committee on Publication Ethics

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Committee on Publication Ethics

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