fig9

Comparison of k-mer-based <i>de novo</i> comparative metagenomic tools and approaches

Figure 9. Comparison of taxonomic and k-mer-based approaches on a large dataset of infant fecal metagenomes. (A) Average composition of the samples grouped by sample origin at the Family level, taxonomic families with a prevalence below 10% and a relative abundance below 5% were grouped as “Other”; (B) PcoA of the samples on the taxonomic profiles at the species level using a Bray-Curtis distance; (C) PcoA of the samples on the taxonomic profiles at the species level using a presence/absence Jaccard distance; (D) PcoA of the samples on the k-mer spectra using a Bray-Curtis distance (E) PcoA of the samples on k-mer spectra profiles using a presence/absence Jaccard distance.

Microbiome Research Reports
ISSN 2771-5965 (Online)

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