fig9

Use of “default” parameter settings when analyzing single cell RNA sequencing data using Seurat: a biologist's perspective

Figure 9. Bar graphs showing differences when regressing out total UMI count (RNA) and percent of UMI count attributed to mitochondrial genes (% mito) in: (A) cluster number; (B) percent of cells called concordantly; and (C) the ARI measurement. Baseline analysis regressed both RNA and %mito (both). UMI: universal molecular identifier; ARI: adjusted rand index